Level Set Segmentation: Active Contours without edge

mosaliganti, kishore ,smith, benjamin,gelas, arnaud,gouaillard, alexandre1*,megason, sean
1.Singapore Agency for Science Technology and Research
Abstract
Level Set Segmentation: Active Contours without edge

Abstract

An Insight Toolkit (ITK) processing framework for segmentation using active contours without edges is presented in this paper. Our algorithm is based on the work of Chan and Vese [1] that uses level- sets to accomplish region segmentation in images with poor or no gradient information. The basic idea is to partion the image into two piecewise constant intensity regions. This work is in contrast to the level-set methods currently available in ITK which necessarily require gradient information. Similar to those methods, the methods presented in this paper are also made efficient using a sparse implementation strategy that solves the contour evolution PDE at the level-set boundary. The framework consists of 6 new ITK filters that inherit in succession from itk::SegmentationFilter. We include 2D/3D example code, parameter settings and show the results generated on a 2D cardiac image.

Keywords

chan and veselevel set
Manuscript
Source Code and Data

Source Code and Data

ActiveContoursWithoutEdgesAlgorithmsDenseitkDenseMultiphaseLevelSetImageFilter.h3.7 KBitkDenseMultiphaseLevelSetImageFilter.txx3.3 KBitkDenseMultiphaseSegmentationLevelSetImageFilter.h14.5 KBitkDenseMultiphaseSegmentationLevelSetImageFilter.txx3.4 KBSparseitkSparseMultiphaseLevelSetImageFilter.h4 KBitkSparseMultiphaseLevelSetImageFilter.txx3.6 KBitkSparseMultiphaseSegmentationLevelSetImageFilter.h14.5 KBitkSparseMultiphaseSegmentationLevelSetImageFilter.txx3.3 KBBasicFiltersDenseitkMultiphaseDenseSegmentationFiniteDifferenceImageFilter.h7.6 KBitkMultiphaseDenseSegmentationFiniteDifferenceImageFilter.txx7.5 KBSparseitkMultiphaseSparseFieldLevelSetImageFilter.h21.9 KBitkMultiphaseSparseFieldLevelSetImageFilter.txx25.7 KBitkMultiphaseSparseFieldLevelSetImageFilter2.txx20.4 KBCommonitkMultiphaseFiniteDifferenceImageFilter.h17.6 KBitkMultiphaseFiniteDifferenceImageFilter.txx7.3 KBitkVectorShiftScaleImageFilter.h4.5 KBitkVectorShiftScaleImageFilter.txx4.3 KBLevelsetFunctionsitkRegionBasedLevelSetFunction.h6.5 KBitkRegionBasedLevelSetFunction.txx15.7 KBitkScalarChanAndVeseLevelSetFunction.h3.8 KBitkScalarChanAndVeseLevelSetFunction.txx5.1 KBitkScalarChanAndVeseSharedFunctionData.h8 KBitkScalarLevelSetFunctionBase.h3.6 KBitkScalarLevelSetFunctionBase.txx5.1 KBCMakeLists.txt660 BOptionsanyoption.cxx24.5 KBanyoption.h7.5 KBexamplesActiveContoursWithoutEdgesCMakeLists.txt1.2 KBScalarMultiPhase2DTest.cxx8.4 KBScalarMultiPhase3DTest.cxx8.4 KBScalarSinglePhase3DTest.cxx6.4 KBScalarSinglePhaseDense2DTest.cxx6.8 KBScalarSinglePhaseSparse2DTest.cxx6.4 KBOptionsCMakeLists.txt200 Bdemo.cxx3.3 KBCMakeLists.txt59 BtestData30-dist.mha809.6 KB30-feature.mha809.6 KB30-fg.mha404.9 KB30-levelset.mha404.9 KB30-gf.mha809.6 KB30-segment.mha404.9 KB30-voronoi.mha404.9 KB30.png162.2 KBMultiphase2DSeg1.mha25.2 KBMultiphase2DSeg2.mha25.2 KBMultiphase2DSeg3.mha25.2 KBMultiphase2Dphi1.mha25.1 KBMultiphase2Dphi2.mha25.1 KBMultiphase2Dphi3.mha25.1 KBMultiphaseCells2D.png4.8 KBexample2D.png10.7 KBfeatureTrack2D.png897 BfinalSegTrack2D.png327 BinitSegTrack2D.png256 Bphi.mha56.1 KBsegDense2D.mha56.3 KBsegSparse2D.mha56.3 KB

Select a file to preview